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Hello i wondered if anyone has any thoughts about this.  I am taking 40 ml of cds a day, if i drink a gallon of water normally throughout an 8 hour period, would there be any reason to not mix the cds in my gallon of water and drink it all throughout the day. In doing this i will avoid the burning in my throat and it will keep cds in my system constantly for 8 hours

That idea is basically an all-day bottle of CLO2, dosed hourly until gone. 

It is important, if possible, to keep the bottle cold, below 10C (50F), so CLO2 will outgas less when the bottle is opened to take out a dose. You might want to split the gallon of CDS water into smaller bottles. And keep sunlight away from the bottles, as ultraviolet light will cause outgassing. 

Since CDS is highly diluted in that much water, there is no need to add additional water to each hourly dose. 

would there be any issue keeping it in a stainless steel bottle?

If using CDS, stainless steel should be okay to use. But not okay if using MMS1 or CDH.